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alamut™ visual plus  (Sophia Genetics)


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    Structured Review

    Sophia Genetics alamut™ visual plus
    Alamut™ Visual Plus, supplied by Sophia Genetics, used in various techniques. Bioz Stars score: 97/100, based on 1558 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/alamut/Alamut%E2%84%A2+Visual+Plus/custom%40alamut-visual-plus%4042376640
    Average 97 stars, based on 1558 article reviews
    alamut™ visual plus - by Bioz Stars, 2026-09
    97/100 stars

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    Related Articles

    other:

    Article Title: The population frequency of predicted pathogenic variants in the genes associated with Autosomal Dominant Polycystic Liver Disease (ADPLD) and kidney cysts
    Article Snippet: The canonical mRNA transcripts and the locations of the final nucleotide beyond which variants do not result in nonsense mediated decay were obtained from Alamut ( https://www.sophiagenetics.com ).

    Article Title: Characterization of a novel factor X variant, p.F139L, associated with bleedings in heterozygous and compound heterozygous form.
    Article Snippet: Conservation of affected amino acids was found in Alamut (Alamut Visual Plus Version v1.6.1, ©2022 SOPHIA Genetics), and the population frequencies of the variants were determined in the Oslo University Hospital in house database (OUSWES) and in gnomAD v4.1.0, Exomes and genomes (broadinstitut e.org).

    Article Title: Clinical immunology in chromatinopathies: a scoping review
    Article Snippet: In cases where the consequence of genetic variants was not mentioned or unclear, this was further evaluated by use of ClinVar ( www.ncbi.nlm.nih.gov/clinvar/ ) and Alamut ( www.sophiagenetics.com/platform/alamut-visual-plus/ ).

    Article Title: Typical and atypical ADPKD: predicted pathogenic genetic variants and population frequencies
    Article Snippet: The canonical mRNA (MANE transcripts) and the locations of the cut-offs were obtained from Alamut ( https://www.sophiagenetics.com ).

    Article Title: Typical and atypical ADPKD: predicted pathogenic genetic variants and population frequencies.
    Article Snippet: Background and hypothesis.. The population frequency of AD polycystic kidney disease (ADPKD) has not been known with certainty.. We hypothesized that more accurate population frequencies for typical ( PKD1 , PKD2 ) and atypical ( GANAB , ALG9 , DNAJB11 ALG5 , IFT140 , NEK8 ) ADPKD were possible using a computational approach.

    Article Title: Diagnostic Yield and Genetic Variation in 85 Swedish Patients with Mild to Profound Hearing Loss Analyzed by Whole Genome Sequencing.
    Article Snippet: Variants within genes in the current gene panel (HearSeq) as well as in mtDNA were interpreted in Scout, with support from Alamut (https://www.sophiagenetics.com/ platform/alamut-visual-plus), Integrative Genomics Viewer (https://software.broadinstitute.org/software/igv) and locally developed visualization tools (https://github.com/ClinicalGenomics-Lund/gens).

    DNA Sequencing:

    Article Title: Routine RNA-based analysis of potential splicing variants facilitates genomic diagnostics and reveals limitations of in silico prediction tools.
    Article Snippet: .. Jo urn al Pr e-p roo f 10 Splicing affecting variants predicted in Alamut can be experimentally validated but clinically relevant variants are also missed Most of the variants (n=182/202, 90%) were identified by DNA sequencing and were initially assessed by the splicing prediction algorithms included in Alamut Visual Plus (SpliceSiteFinder-like, MaxEntScan, NNSPLICE and GeneSplicer). ..

    Article Title: Routine RNA-based analysis of potential splicing variants facilitates genomic diagnostics and reveals limitations of in silico prediction tools
    Article Snippet: .. Splicing affecting variants predicted in Alamut can be experimentally validated, but clinically relevant variants are also missed Most of the variants (n = 182/202, 90%) were identified by DNA sequencing and were initially assessed by the splicing prediction algorithms included in Alamut Visual Plus (SpliceSiteFinder-like, MaxEntScan, NNSPLICE, and GeneSplicer). ..



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